Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015788314.1_cds_XP_016460000.1_500
CDS Infomation

[gene=LOC107783418] [db_xref=GeneID:107783418] [protein=pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like isoform X2] [protein_id=XP_016460000.1] [location=join(1917..2944,4260..4380)] [gbkey=CDS]
Sequence

ATGAACAGAAGAGCAAGAGCTGCAGCAAAGCCTCTTCTTGACGAATCCCGATTTCAAAGG
GCTGTAACTCAGCTTCCACCTAGATTTACCCCTGAAGAACTGAGGGATGTCATGACTTCA
CAAAATGATCCTTTAGTGTGTTTGGAGTTGTTCAATTGGGCATCGAAACAACACAGGTTT
AGGCATGATGTTTCGACGTGTCATGTTGCCATACAACGGCTTGGTGAAGCGAAAATGTAT
GAAGAAATGGATCATATTGTTAATCAAGTGCTTGCCGTTCCATCTATTGGGTCCGAGGCG
CTTTTCAATTCAATGATTTATTATTTCACGGAAGCTAGGAAGTTGACTCGAGCAGTGATG
ATATATAAGCATATGTTAAATAGTAGGAAATTGGATTGTAGGCCGTCGATTAAAACTTAT
AATACCCTTTTCGCGGCTCTTCTTAGTAGGAGGAATAATTCGTATATAAATCACATGTAT
ATGGACACTATAAGGTCCCTCTTCAAGCAAATGGTTGATAATGGGATTGAACCGGATATC
TTTTCCTTGAATACCATGATAAAAGGATACGTGCTTTCACTTCATGTGAATGATGCCCTT
AGGGTGTTTCACCAAATGGGCGTGGTTTACCAATGCCAGCCCAACTCATTTTCATATGAT
TATCTGATTCATGGGTTATGTGCGCAAGGACGAACGAAGAATGCTAAGGAAATTTATGAT
AAGATGAAGTGCAAAGCATTCATACCTAGTAGTAAATCGTACAACTCGCTAGTGAACTCC
TTGGCTCTTGGCGGAGAGGTTGATGAGGCAGTGAAATTCTTGTGGGAGATGAACGAAAAC
CGAAGAACAATTGACCACATCACCTTCCAAACAGTAATTGATGAAGTCTGCCGGCAAAAA
AGTGTGAAAGATGCCATCGGCTTGTTGAAGGAGTTGCAAGATAAGGACATCGTCGATGGT
CTTACTCATAGCAAGCTTCTGTGTGAACTTGAGGATGATGTTCATTTAAATGTCAGAAAT
CGGTACAGCAAACGTGATGTTGAGAAATTTTGGATGCTGCAGCTAAGGAAAGAAAATCAC
ATTGACATGATGGCTCTGAGAAAGCAGTTTCAATTGACAAGAGCTGAACCTAATGAGTGC
TTGACTTGA

Peptide Sequence

PEP ID

XP_016460000.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

MNRRARAAAKPLLDESRFQRAVTQLPPRFTPEELRDVMTSQNDPLVCLELFNWASKQHRF
RHDVSTCHVAIQRLGEAKMYEEMDHIVNQVLAVPSIGSEALFNSMIYYFTEARKLTRAVM
IYKHMLNSRKLDCRPSIKTYNTLFAALLSRRNNSYINHMYMDTIRSLFKQMVDNGIEPDI
FSLNTMIKGYVLSLHVNDALRVFHQMGVVYQCQPNSFSYDYLIHGLCAQGRTKNAKEIYD
KMKCKAFIPSSKSYNSLVNSLALGGEVDEAVKFLWEMNENRRTIDHITFQTVIDEVCRQK
SVKDAIGLLKELQDKDIVDGLTHSKLLCELEDDVHLNVRNRYSKRDVEKFWMLQLRKENH
IDMMALRKQFQLTRAEPNECLT

Transcript Sequence

Gene sequence data has not been registered.